{"id":11603,"date":"2024-08-12T09:25:55","date_gmt":"2024-08-12T13:25:55","guid":{"rendered":"https:\/\/www.vdh.virginia.gov\/surveillance-and-investigation\/?page_id=11603"},"modified":"2025-08-14T06:12:09","modified_gmt":"2025-08-14T10:12:09","slug":"genomic-sequencing","status":"publish","type":"page","link":"https:\/\/www.vdh.virginia.gov\/surveillance-and-investigation\/genomic-epidemiology\/genomic-sequencing\/","title":{"rendered":"Genomic Sequencing"},"content":{"rendered":"<div id=\"pl-11603\"  class=\"panel-layout\" ><div id=\"pg-11603-0\"  class=\"panel-grid panel-no-style\" ><div id=\"pgc-11603-0-0\"  class=\"panel-grid-cell\" ><div id=\"panel-11603-0-0-0\" class=\"so-panel widget widget_sow-editor panel-first-child panel-last-child\" data-index=\"0\" ><div\n\t\t\t\n\t\t\tclass=\"so-widget-sow-editor so-widget-sow-editor-base\"\n\t\t\t\n\t\t>\n<div class=\"siteorigin-widget-tinymce textwidget\">\n\t<p>&nbsp;<\/p>\n<h2><b><span data-contrast=\"none\">How Does Genomic Sequencing Work? <\/span><\/b><\/h2>\n<p><span data-contrast=\"none\"><strong>Genomic sequencing<\/strong> is a term used to describe a variety of laboratory procedures that provide detailed information about the genetic makeup of infectious disease pathogens (germs) that are making people sick.<\/span><span data-ccp-props=\"{&quot;335557856&quot;:16777215,&quot;335559739&quot;:0}\">\u00a0<\/span><\/p>\n<p><span data-contrast=\"none\">The genome of disease-causing pathogens is made up of DNA or RNA. Both DNA and RNA are formed with \u201cbuilding blocks\u201d called nucleotides<\/span><span data-contrast=\"auto\"> that tell us important information about a pathogen. The laboratory process of reading these nucleotides with bioinformatic tools is called <strong>sequencing<\/strong>. Analyzing the genome of various pathogens tell us more information about the germs that are causing disease in an individual person or in a population. VDH uses genomic information to find potential transmission links during public health disease investigations and to identify common sources of exposure in outbreak investigations.<\/span><span data-ccp-props=\"{&quot;335557856&quot;:16777215,&quot;335559739&quot;:0}\">\u00a0<\/span><\/p>\n<h2><span data-ccp-props=\"{&quot;335557856&quot;:16777215,&quot;335559739&quot;:0}\">\u00a0<\/span><b><span data-contrast=\"none\">How Are Genomic Sequencing Results Used?<\/span><\/b><span data-ccp-props=\"{&quot;335557856&quot;:16777215,&quot;335559739&quot;:0}\">\u00a0<\/span><\/h2>\n<ul>\n<li><b><span data-contrast=\"none\">Analyzing and Visualizing Disease Data. <\/span><\/b><span data-contrast=\"none\">VDH<\/span> <span data-contrast=\"none\">can analyze disease outbreak data from several sources. These include case information from our disease surveillance systems and pathogen genomic results. VDH creates data visualizations of pathogen genomic results using analytical tools such as <\/span><a href=\"https:\/\/microbetrace.cdc.gov\/MicrobeTrace\/\"><span data-contrast=\"none\">Microbetrace<\/span><\/a><span data-contrast=\"none\">, <\/span><a href=\"https:\/\/nextstrain.org\/\"><span data-contrast=\"none\">Nextstrain<\/span><\/a><span data-contrast=\"none\">, and <\/span><a href=\"https:\/\/microreact.org\/\"><span data-contrast=\"none\">Microreact<\/span><\/a><span data-contrast=\"none\">. These tools allow us to see how diseases are spreading through transmission network diagrams, maps, and phylogenetic trees.\u00a0 <\/span><span data-ccp-props=\"{&quot;335557856&quot;:16777215,&quot;335559739&quot;:0}\">\u00a0<\/span><\/li>\n<li><b><span data-contrast=\"none\">Interpreting Reports and Communicating Findings. <\/span><\/b><span data-contrast=\"none\">The VDH Genomic Epidemiology Program interprets genomic results and develops methods to make this information easier to understand.<\/span><span data-ccp-props=\"{&quot;335557856&quot;:16777215,&quot;335559739&quot;:0}\">\u00a0<\/span><\/li>\n<li><span class=\"TextRun SCXW208447128 BCX8\" lang=\"EN-US\" xml:lang=\"EN-US\" data-contrast=\"none\"><strong><span class=\"NormalTextRun SCXW208447128 BCX8\">Taking Public Health Action<\/span><\/strong><span class=\"NormalTextRun SCXW208447128 BCX8\">. <\/span><\/span><span class=\"TextRun SCXW208447128 BCX8\" lang=\"EN-US\" xml:lang=\"EN-US\" data-contrast=\"none\"><span class=\"NormalTextRun SCXW208447128 BCX8\">The Genomic<\/span> <span class=\"NormalTextRun SCXW208447128 BCX8\">Epidemiology <\/span><span class=\"NormalTextRun SCXW208447128 BCX8\">Program works <\/span><span class=\"NormalTextRun SCXW208447128 BCX8\">closely <\/span><span class=\"NormalTextRun SCXW208447128 BCX8\">with other <\/span><span class=\"NormalTextRun SCXW208447128 BCX8\">infectious disease <\/span><span class=\"NormalTextRun SCXW208447128 BCX8\">programs at VDH. <\/span><span class=\"NormalTextRun SCXW208447128 BCX8\">Together we try to prevent and control outbreaks in Virginia.<\/span><\/span><span class=\"EOP SCXW208447128 BCX8\" data-ccp-props=\"{&quot;335557856&quot;:16777215,&quot;335559739&quot;:0}\">\u00a0<\/span><\/li>\n<\/ul>\n<\/div>\n<\/div><\/div><\/div><\/div><\/div>","protected":false},"excerpt":{"rendered":"<p>&nbsp; How Does Genomic Sequencing Work? Genomic sequencing is a term used to describe a variety of laboratory procedures that provide detailed information about the genetic makeup of infectious disease pathogens (germs) that are making people sick.\u00a0 The genome of disease-causing pathogens is made up of DNA or RNA. Both DNA and RNA are formed [&hellip;]<\/p>\n","protected":false},"author":230,"featured_media":0,"parent":11577,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"_lmt_disableupdate":"no","_lmt_disable":"","footnotes":""},"tags":[],"class_list":["post-11603","page","type-page","status-publish","hentry"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.3 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Genomic Sequencing - Surveillance and Investigation<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.vdh.virginia.gov\/surveillance-and-investigation\/genome-sequencing\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Genomic Sequencing - Surveillance and Investigation\" \/>\n<meta property=\"og:description\" content=\"&nbsp; How Does Genomic Sequencing Work? Genomic sequencing is a term used to describe a variety of laboratory procedures that provide detailed information about the genetic makeup of infectious disease pathogens (germs) that are making people sick.\u00a0 The genome of disease-causing pathogens is made up of DNA or RNA. Both DNA and RNA are formed [&hellip;]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.vdh.virginia.gov\/surveillance-and-investigation\/genome-sequencing\/\" \/>\n<meta property=\"og:site_name\" content=\"Surveillance and Investigation\" \/>\n<meta property=\"article:modified_time\" content=\"2025-08-14T10:12:09+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/www.vdh.virginia.gov\/content\/uploads\/sites\/13\/2024\/08\/genome-sequencing-cdc.png\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:label1\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data1\" content=\"2 minutes\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\\\/\\\/schema.org\",\"@graph\":[{\"@type\":\"WebPage\",\"@id\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/genome-sequencing\\\/\",\"url\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/genome-sequencing\\\/\",\"name\":\"Genomic Sequencing - Surveillance and Investigation\",\"isPartOf\":{\"@id\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/#website\"},\"datePublished\":\"2024-08-12T13:25:55+00:00\",\"dateModified\":\"2025-08-14T10:12:09+00:00\",\"breadcrumb\":{\"@id\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/genome-sequencing\\\/#breadcrumb\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/genome-sequencing\\\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/genome-sequencing\\\/#breadcrumb\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Home\",\"item\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/\"},{\"@type\":\"ListItem\",\"position\":2,\"name\":\"Genome Sequencing\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/#website\",\"url\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/\",\"name\":\"Surveillance and Investigation\",\"description\":\"To promote and protect the health of all Virginians\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\\\/\\\/www.vdh.virginia.gov\\\/surveillance-and-investigation\\\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-US\"}]}<\/script>\n<!-- \/ Yoast SEO plugin. -->","yoast_head_json":{"title":"Genomic Sequencing - Surveillance and Investigation","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/www.vdh.virginia.gov\/surveillance-and-investigation\/genome-sequencing\/","og_locale":"en_US","og_type":"article","og_title":"Genomic Sequencing - Surveillance and Investigation","og_description":"&nbsp; How Does Genomic Sequencing Work? 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